Bryce's Space

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Research

Examining synchrony of neural assemblies through simulation using PRC pulse-coupled models

Summer09 Projects

  • Submit PhysRevE paper on oscillator synchrony
    • Figures
    • Dig into lit
    • Write
  • Submit Computational Neuroscience paper on epilepsy asynchrony-->synchrony
  • Model grid like Zochowski et al. with epileptic relevant PRC changes including channel changes
  • Get CUDA operational code for parallel processing of conductance based model
  • Bard's predictive measurement of noise and PRC
    • 2cell net and figures
  • Small SWN of several kinds of inhibitory cells. Code up OLM + basket cells. Whittington/Kopell papers examining gamma oscillations and OLM cells
  • Network model of mutated channels using GACell PRCs and exp. PRCs on grid. Use elmo?

Readings

  • Predicting synchronized neural assemblies from experimentally estimated phase-resetting curves, RF Galan, GB Ermentrout, NN Urban, 2006
  • Synchronization in large directed networks of coupled phase oscillators, JG Restrepo, E Ott, BR Hunt, 2005
  • Multiple pulse interactions and averaging in systems of coupled neural oscillators, GB Ermentrout, N Kopell, 1991
  • Rhythms of the Brain, Buszaki, 2006
  • Brain Dynamics, Haken, 2007 ed
  • Fast Oscillations in Cortical Circuits, Traub et al. 1999
  • Interaction of Cellular and Network Mechanisms in Spatiotemporal Pattern Formation in Neuronal Networks, Bogaard,Andrew; Parent,Jack; Zochowski,Michal; Booth,Victoria, JNeurosci 2009
  • Understanding Complex Systems, Springer Berlin / Heidelberg, 2008

Lab Presentations

  • Response Properties and Synchronization of Rhythmically Firing Dendritic Neurons, Goldberg, Deister, Wilson (JNeurophys 97)
  • Interaction of Cellular and Network Mechanisms in Spatiotemporal Pattern Formation in Neuronal Networks, Zochowski et al. (JNeurosci 2009)

Grants

Tay's R01 submitted early 09

People to get to know

  • Tim Lewis - UCDavis Math
  • Duane Nykamp - UMN Math
  • Roberto Galan - Carnegie Mellon - Bio
  • Bard Ermentrout - Pitts Math

Research Blog

Neural Networks at Work

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